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  5. Seita.2G254100.1

Seita.2G254100.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G254100.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
76748 No alias beta glucosidase 40 0.02 Orthogroups_2024-Update
88863 No alias beta glucosidase 40 0.02 Orthogroups_2024-Update
A4A49_38840 No alias beta-glucosidase 47 0.03 Orthogroups_2024-Update
At2g44460 No alias Beta-glucosidase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3B3] 0.03 Orthogroups_2024-Update
Bradi5g13265 No alias beta glucosidase 13 0.01 Orthogroups_2024-Update
Glyma.02G155800 No alias beta glucosidase 11 0.02 Orthogroups_2024-Update
Glyma.07G151900 No alias beta glucosidase 11 0.03 Orthogroups_2024-Update
LOC_Os08g39870 No alias Os8bglu28 - beta-glucosidase homologue, similar to... 0.02 Orthogroups_2024-Update
PSME_00010142-RA No alias (at1g02850 : 502.0) beta glucosidase 11 (BGLU11);... 0.02 Orthogroups_2024-Update
PSME_00019735-RA No alias (at1g26560 : 751.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
PSME_00030070-RA No alias (at1g26560 : 405.0) beta glucosidase 40 (BGLU40);... 0.02 Orthogroups_2024-Update
Potri.001G223500 No alias beta glucosidase 27 0.02 Orthogroups_2024-Update
Seita.3G270000.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Seita.4G134400.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.006G117300.2 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.008G079800.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 33 503
No external refs found!