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  5. Seita.2G255400.1

Seita.2G255400.1


Description : Unknown function


Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G255400.1
Cluster HCAA Clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
A4A49_11916 No alias protein pin-likes 1 0.03 Orthogroups_2024-Update
Bradi3g60730 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Brara.B02272.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.02 Orthogroups_2024-Update
Brara.G03026.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.02 Orthogroups_2024-Update
Glyma.10G189000 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G073630.3 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 11 69
No external refs found!