1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.2G263000.1

Seita.2G263000.1


Description : regulatory protein (CIB) of blue light perception & bHLH-type transcription factor


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G263000.1
Cluster HCAA Clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
A4A49_30096 No alias transcription factor bhlh48 0.03 Orthogroups_2024-Update
A4A49_36055 No alias transcription factor bhlh137 0.03 Orthogroups_2024-Update
At3g07340 No alias Transcription factor bHLH62... 0.04 Orthogroups_2024-Update
Glyma.04G012500 No alias cryptochrome-interacting basic-helix-loop-helix 1 0.02 Orthogroups_2024-Update
Glyma.05G031800 No alias BIG PETAL P 0.04 Orthogroups_2024-Update
LOC_Os04g28280 No alias BEE 3, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G248500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G146500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G023600 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.009G117300 No alias cryptochrome-interacting basic-helix-loop-helix 1 0.04 Orthogroups_2024-Update
Solyc09g097870 No alias bHLH transcription factor 062 0.03 Orthogroups_2024-Update
Sopen02g013710 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 285 332
No external refs found!