Seita.2G263400.1


Description : pectin methylesterase


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G263400.1
Cluster HCAA Clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.02 Orthogroups_2024-Update
At1g53830 No alias Pectinesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42534] 0.04 Orthogroups_2024-Update
Glyma.15G183700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 7 181
IPR000070 Pectinesterase_cat 236 286
No external refs found!