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  5. Seita.2G274200.1

Seita.2G274200.1


Description : regulatory protein *(FPA) of TNL-mediated effector-triggered immunity


Gene families : OG_42_0005823 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G274200.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Bradi4g35250 No alias RNA binding 0.02 Orthogroups_2024-Update
Glyma.12G051000 No alias RNA binding 0.03 Orthogroups_2024-Update
Kfl00321_0080 kfl00321_0080_v1.1 (at2g43410 : 202.0) FPA is a gene that regulates... 0.03 Orthogroups_2024-Update
MA_10435314g0010 No alias (at2g43410 : 434.0) FPA is a gene that regulates... 0.05 Orthogroups_2024-Update
Mp4g06830.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044599 AP-5 adaptor complex IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 118 181
IPR000504 RRM_dom 40 103
IPR000504 RRM_dom 245 299
IPR012921 SPOC_C 431 548
No external refs found!