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  5. Seita.2G279300.1

Seita.2G279300.1


Description : TCP-type transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G279300.1
Cluster HCAA Clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
At3g27010 No alias TCP20 [Source:UniProtKB/TrEMBL;Acc:A0A178VAT1] 0.03 Orthogroups_2024-Update
Bradi4g41430 No alias TCP family transcription factor 0.04 Orthogroups_2024-Update
Brara.D01115.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.09G284500 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Glyma.16G004300 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Glyma.19G095300 No alias TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family... 0.03 Orthogroups_2024-Update
Glyma.20G154400 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G035980.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G059930.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os02g42380 No alias TCP family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Mp7g09490.1 No alias transcription factor (TCP) 0.03 Orthogroups_2024-Update
Potri.006G125800 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.04 Orthogroups_2024-Update
Pp1s67_183V6 No alias F1P2.170; TCP family transcription factor, putative... 0.04 Orthogroups_2024-Update
Seita.1G376200.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Sobic.006G025000.2 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Solyc02g094290 No alias TCP transcription factor 27 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 75 136
No external refs found!