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  5. Seita.2G279400.1

Seita.2G279400.1


Description : 3-hydroxy-3-methylglutaryl-CoA synthase & EC_2.3 acyltransferase


Gene families : OG_42_0002432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002432_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.2G279400.1
Cluster HCAA Clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
179152 No alias hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /... 0.04 Orthogroups_2024-Update
Mp4g22640.1 No alias 3-hydroxy-3-methylglutaryl-CoA synthase 0.02 Orthogroups_2024-Update
Potri.001G111700 No alias hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /... 0.03 Orthogroups_2024-Update
Solyc08g007790 No alias 3-hydroxy-3-methylglutaryl coenzyme A synthase 0.03 Orthogroups_2024-Update
Solyc08g080170 No alias Hydroxymethylglutaryl-CoA synthase, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEA 16Dec
BP GO:0006084 acetyl-CoA metabolic process IEA 16Dec
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013746 HMG_CoA_synt_C_dom 176 450
IPR013528 HMG_CoA_synth_N 4 175
No external refs found!