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  5. Seita.2G281600.1

Seita.2G281600.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G281600.1
Cluster HCAA Clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
A4A49_35789 No alias f-box protein pp2-a13 0.04 Orthogroups_2024-Update
At3g53000 No alias F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92] 0.03 Orthogroups_2024-Update
At3g61060 No alias Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33] 0.03 Orthogroups_2024-Update
HORVU1Hr1G048690.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
HORVU1Hr1G048700.4 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
LOC_Os03g02550 No alias OsFBX76 - F-box domain containing protein, expressed 0.04 Orthogroups_2024-Update
Potri.003G121900 No alias phloem protein 2-A12 0.03 Orthogroups_2024-Update
Pp1s403_1V6 No alias T16F16.2; F-box family protein / SKP1 interacting... 0.02 Orthogroups_2024-Update
Seita.9G567400.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sobic.001G532000.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.05 Orthogroups_2024-Update
Solyc09g008820 No alias F-box protein PP2-A13 (AHRD V3.3 *** A0A072U2Z8_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 21 59
IPR025886 PP2-like 126 284
No external refs found!