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  5. Seita.2G282800.1

Seita.2G282800.1


Description : RNA splicing regulator *(NSR)


Gene families : OG_42_0000999 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G282800.1
Cluster HCAA Clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
A4A49_32186 No alias rna-binding protein 2 0.03 Orthogroups_2024-Update
Glyma.10G226600 No alias nucleotide binding;nucleic acid binding 0.02 Orthogroups_2024-Update
Solyc06g033800 No alias LOW QUALITY:RNA-binding family protein (AHRD V3.3 *-*... 0.01 Orthogroups_2024-Update
Solyc06g052100 No alias RNA-binding family protein (AHRD V3.3 *-* B9GTK9_POPTR) 0.01 Orthogroups_2024-Update
Solyc06g052140 No alias RNA-binding family protein (AHRD V3.3 --* B9GTK9_POPTR) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 333 397
No external refs found!