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  5. Seita.2G284000.1

Seita.2G284000.1


Description : HD-ZIP I/II-type transcription factor


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G284000.1
Cluster HCAA Clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
19476 No alias homeobox 1 0.03 Orthogroups_2024-Update
A4A49_39997 No alias homeobox-leucine zipper protein athb-13 0.02 Orthogroups_2024-Update
At4g40060 No alias HB16 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P3] 0.03 Orthogroups_2024-Update
Bradi1g71930 No alias homeobox 3 0.05 Orthogroups_2024-Update
Bradi1g73190 No alias Homeobox-leucine zipper protein family 0.02 Orthogroups_2024-Update
Bradi3g38600 No alias homeobox protein 5 0.06 Orthogroups_2024-Update
Bradi4g29380 No alias homeobox 1 0.03 Orthogroups_2024-Update
Brara.B00111.1 No alias regulatory protein *(LMI1) of floral meristem identity... 0.03 Orthogroups_2024-Update
Brara.B00590.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B01882.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C00130.1 No alias regulatory protein *(LMI1) of floral meristem identity... 0.03 Orthogroups_2024-Update
Brara.C00651.1 No alias HD-ZIP I/II-type transcription factor 0.01 Orthogroups_2024-Update
Brara.D02811.1 No alias HD-ZIP I/II-type transcription factor 0.01 Orthogroups_2024-Update
Brara.E03620.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G00177.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I04272.1 No alias HD-ZIP I/II-type transcription factor 0.01 Orthogroups_2024-Update
Glyma.04G231400 No alias homeobox 7 0.04 Orthogroups_2024-Update
Glyma.16G021000 No alias homeobox 7 0.02 Orthogroups_2024-Update
HORVU4Hr1G078410.2 No alias HD-ZIP I/II-type transcription factor 0.06 Orthogroups_2024-Update
LOC_Os03g08960 No alias homeobox associated leucine zipper, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g29460 No alias homeobox associated leucine zipper, putative, expressed 0.02 Orthogroups_2024-Update
Potri.011G114500 No alias homeobox protein 52 0.03 Orthogroups_2024-Update
Pp1s31_96V6 No alias dna-binding protein 0.02 Orthogroups_2024-Update
Seita.1G253700.1 No alias HD-ZIP I/II-type transcription factor 0.04 Orthogroups_2024-Update
Seita.9G524200.1 No alias HD-ZIP I/II-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G488900.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g082550 No alias Homeobox leucine zipper (AHRD V3.3 *-* J7FWS7_ROSRU) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 30 84
IPR003106 Leu_zip_homeo 86 128
No external refs found!