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  5. Seita.2G310800.1

Seita.2G310800.1


Description : Unknown function


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G310800.1
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
98227 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.04 Orthogroups_2024-Update
A4A49_36420 No alias protein argonaute 5 0.04 Orthogroups_2024-Update
AC217043.3_FG007 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
At5g21030 No alias PAZ domain-containing protein / piwi domain-containing... 0.02 Orthogroups_2024-Update
At5g43810 No alias Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1] 0.01 Orthogroups_2024-Update
Brara.C01682.1 No alias siRNA-integrating factor *(AGO) 0.02 Orthogroups_2024-Update
GRMZM2G141818 No alias Argonaute family protein 0.01 Orthogroups_2024-Update
GRMZM2G432075 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
Glyma.10G002700 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.04 Orthogroups_2024-Update
Glyma.10G242800 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Orthogroups_2024-Update
Glyma.12G083500 No alias Argonaute family protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G045050.1 No alias Unknown function 0.01 Orthogroups_2024-Update
LOC_Os03g47830 No alias argonaute, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g06770 No alias argonaute, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g28850 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Sobic.008G087200.1 No alias siRNA-integrating factor *(AGO) 0.03 Orthogroups_2024-Update
Solyc01g010970 No alias Argonaute7 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032474 Argonaute_N 137 270
IPR032473 Argonaute_Mid_dom 519 594
IPR003100 PAZ_dom 347 446
IPR014811 ArgoL1 290 321
IPR003165 Piwi 610 911
No external refs found!