At4g16720

Description : Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:A0A178V5T1]

Gene families : OG_42_0002052 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002052_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g16720
Cluster	HCCA clusters: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method
270259	No alias	Ribosomal protein L23/L15e family protein	0.03	Orthogroups_2024-Update
A4A49_58101	No alias	60s ribosomal protein l15-1	0.04	Orthogroups_2024-Update
Bradi1g27332	No alias	Ribosomal protein L23/L15e family protein	0.04	Orthogroups_2024-Update
Bradi3g23072	No alias	Ribosomal protein L23/L15e family protein	0.03	Orthogroups_2024-Update
Brara.A01864.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
Brara.C04524.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Brara.C04547.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Brara.H00875.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Brara.H00923.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Cre02.g091100	No alias	Ribosomal protein L23/L15e family protein	0.03	Orthogroups_2024-Update
Glyma.01G207700	No alias	Ribosomal protein L23/L15e family protein	0.05	Orthogroups_2024-Update
Glyma.05G061400	No alias	Ribosomal protein L23/L15e family protein	0.06	Orthogroups_2024-Update
Glyma.11G034700	No alias	Ribosomal protein L23/L15e family protein	0.05	Orthogroups_2024-Update
Glyma.17G143200	No alias	Ribosomal protein L23/L15e family protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G052650.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
LOC_Os03g40180	No alias	60S ribosomal protein L15, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g19370	No alias	60S ribosomal protein L15, putative, expressed	0.04	Orthogroups_2024-Update
Mp1g06500.1	No alias	component RPL15 of LSU proteome component	0.03	Orthogroups_2024-Update
Pp1s134_151V6	No alias	FCAALL.416; 60S ribosomal protein L15 (RPL15A)...	0.04	Orthogroups_2024-Update
Pp1s152_141V6	No alias	60S ribosomal protein L15-1 [Picea mariana]	0.05	Orthogroups_2024-Update
Pp1s28_15V6	No alias	60S ribosomal protein L15-1 [Picea mariana]	0.02	Orthogroups_2024-Update
Pp1s34_445V6	No alias	60S ribosomal protein L15-1 [Picea mariana]	0.05	Orthogroups_2024-Update
Pp1s7_364V6	No alias	FCAALL.416; 60S ribosomal protein L15 (RPL15A)...	0.03	Orthogroups_2024-Update
Seita.2G046800.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Seita.2G317300.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Sobic.002G047600.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Sobic.002G304900.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Solyc04g008460	No alias	SET-domain containing protein lysine methyltransferase...	0.06	Orthogroups_2024-Update
Solyc06g060400	No alias	Ribosomal protein L15 (AHRD V3.3 *** K4C6M0_SOLLC)	0.07	Orthogroups_2024-Update
Solyc06g064630	No alias	Ribosomal protein L15 (AHRD V3.3 *** K4C793_SOLLC)	0.03	Orthogroups_2024-Update
Sopen04g003610	No alias	Ribosomal L15	0.04	Orthogroups_2024-Update
Sopen06g020540	No alias	Ribosomal L15	0.06	Orthogroups_2024-Update
Sopen06g023110	No alias	Ribosomal L15	0.08	Orthogroups_2024-Update
evm.model.contig_2025.57	No alias	(at4g16720 : 267.0) Ribosomal protein L23/L15e family...	0.07	Orthogroups_2024-Update
evm.model.tig00000310.75	No alias	(at4g16720 : 256.0) Ribosomal protein L23/L15e family...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Predicted GO
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Predicted GO
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Predicted GO
MF	GO:0004640	phosphoribosylanthranilate isomerase activity	IEP	Predicted GO
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005759	mitochondrial matrix	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006188	IMP biosynthetic process	IEP	Predicted GO
BP	GO:0006189	'de novo' IMP biosynthetic process	IEP	Predicted GO
BP	GO:0006302	double-strand break repair	IEP	Predicted GO
BP	GO:0006310	DNA recombination	IEP	Predicted GO
BP	GO:0006351	transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006383	transcription by RNA polymerase III	IEP	Predicted GO
BP	GO:0006568	tryptophan metabolic process	IEP	Predicted GO
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
MF	GO:0008565	protein transporter activity	IEP	Predicted GO
BP	GO:0008610	lipid biosynthetic process	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
MF	GO:0016211	ammonia ligase activity	IEP	Predicted GO
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Predicted GO
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
MF	GO:0019238	cyclohydrolase activity	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
CC	GO:0031974	membrane-enclosed lumen	IEP	Predicted GO
CC	GO:0032040	small-subunit processome	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
MF	GO:0032977	membrane insertase activity	IEP	Predicted GO
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0042430	indole-containing compound metabolic process	IEP	Predicted GO
CC	GO:0043233	organelle lumen	IEP	Predicted GO
BP	GO:0046040	IMP metabolic process	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
CC	GO:0070013	intracellular organelle lumen	IEP	Predicted GO
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predicted GO
MF	GO:0097747	RNA polymerase activity	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO
MF	GO:1901567	fatty acid derivative binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000439	Ribosomal_L15e	2	190

External Links

No external refs found!

At4g16720

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation