At4g16780

Description : Homeobox-leucine zipper protein HAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q05466]

Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g16780
Cluster	HCCA clusters: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Brara.A01857.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00466.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H01735.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.J02556.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.05G062700	No alias	homeobox protein 2	0.03	Orthogroups_2024-Update
Glyma.08G148800	No alias	homeobox from Arabidopsis thaliana	0.04	Orthogroups_2024-Update
HORVU3Hr1G000250.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G065900.5	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g12860	No alias	homeobox associated leucine zipper, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g39720	No alias	homeobox domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g41230	No alias	homeobox associated leucine zipper, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00039873-RA	No alias	(at5g06710 : 208.0) Homeobox-leucine zipper protein.;...	0.02	Orthogroups_2024-Update
PSME_00049755-RA	No alias	(at5g06710 : 157.0) Homeobox-leucine zipper protein.;...	0.02	Orthogroups_2024-Update
Potri.018G133100	No alias	homeobox from Arabidopsis thaliana	0.04	Orthogroups_2024-Update
Pp1s41_32V6	No alias	homeobox-leucine zipper protein	0.02	Orthogroups_2024-Update
Pp1s53_4V6	No alias	hat4	0.02	Orthogroups_2024-Update
Seita.2G224000.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Seita.7G187800.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G297200.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G185200.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Solyc08g078300	No alias	Homeobox-leucine zipper family protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
MF	GO:0008146	sulfotransferase activity	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Predicted GO
MF	GO:0016790	thiolester hydrolase activity	IEP	Predicted GO
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006712	HD-ZIP_N	2	107
IPR003106	Leu_zip_homeo	184	218
IPR001356	Homeobox_dom	128	182

External Links

No external refs found!

At4g16780

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation