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  5. Seita.2G329800.1

Seita.2G329800.1


Description : autophagosome ubiquitin-fold protein *(ATG8)


Gene families : OG_42_0000932 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000932_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G329800.1
Cluster HCAA Clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G003900 No alias Ubiquitin-like superfamily protein 0.02 Orthogroups_2024-Update
Kfl00324_0190 kfl00324_0190_v1.... (at4g16520 : 214.0) autophagy 8f (ATG8F); CONTAINS... 0.03 Orthogroups_2024-Update
Sobic.006G220900.1 No alias autophagosome ubiquitin-fold protein *(ATG8) 0.03 Orthogroups_2024-Update
Solyc02g080590 No alias Autophagy-related protein (AHRD V3.3 *** A0A0V0GZQ3_SOLCH) 0.02 Orthogroups_2024-Update
Solyc07g064680 No alias Autophagy-related protein (AHRD V3.3 *** A0A0V0GZ47_SOLCH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!