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  5. Seita.2G330400.1

Seita.2G330400.1


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G330400.1
Cluster HCAA Clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
At1g52520 No alias Protein FAR1-RELATED SEQUENCE 6... 0.03 Orthogroups_2024-Update
At2g27110 No alias Protein FAR1-RELATED SEQUENCE 3... 0.02 Orthogroups_2024-Update
At4g19990 No alias FAR1-related sequence 1 [Source:UniProtKB/TrEMBL;Acc:F4JU19] 0.05 Orthogroups_2024-Update
At4g38170 No alias Protein FAR1-RELATED SEQUENCE 9... 0.03 Orthogroups_2024-Update
Bradi1g19740 No alias FAR1-related sequence 5 0.06 Orthogroups_2024-Update
Bradi1g29147 No alias FAR1-related sequence 5 0.05 Orthogroups_2024-Update
Brara.G02019.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.11G126700 No alias FRS (FAR1 Related Sequences) transcription factor family 0.04 Orthogroups_2024-Update
Glyma.20G132100 No alias FRS (FAR1 Related Sequences) transcription factor family 0.03 Orthogroups_2024-Update
LOC_Os02g39540 No alias transposon protein, putative, unclassified, expressed 0.04 Orthogroups_2024-Update
LOC_Os12g12380 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.003G031200 No alias FAR1-related sequence 8 0.05 Orthogroups_2024-Update
Potri.010G140600 No alias FAR1-related sequence 11 0.03 Orthogroups_2024-Update
Solyc01g096850 No alias Protein FAR1-RELATED SEQUENCE 3 (AHRD V3.3 *** A0A0B2S126_GLYSO) 0.03 Orthogroups_2024-Update
Solyc07g043260 No alias Far1-related sequence 2-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen04g036490 No alias FAR1 DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 262 339
IPR007527 Znf_SWIM 543 572
IPR004330 FAR1_DNA_bnd_dom 54 140
No external refs found!