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  5. At4g16950

At4g16950


Description : Disease resistance protein RPP5 [Source:UniProtKB/Swiss-Prot;Acc:F4JNB7]


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g16950
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
A4A49_22884 No alias tmv resistance protein n 0.02 Orthogroups_2024-Update
At5g48770 No alias Disease resistance protein [Source:UniProtKB/TrEMBL;Acc:Q9FKB9] 0.04 Orthogroups_2024-Update
Brara.A00236.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.B02903.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Glyma.08G293600 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Glyma.15G024800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G086700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G215300 No alias transmembrane receptors;ATP binding 0.04 Orthogroups_2024-Update
Glyma.19G054900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.U033205 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
MA_10428569g0010 No alias (at1g27170 : 499.0) transmembrane receptors;ATP binding;... 0.02 Orthogroups_2024-Update
PSME_00004928-RA No alias (at1g27170 : 138.0) transmembrane receptors;ATP binding;... 0.02 Orthogroups_2024-Update
Potri.011G013201 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.014G064100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Sopen01g004310 No alias NB-ARC domain 0.03 Orthogroups_2024-Update
Sopen09g019320 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 643 664
IPR001611 Leu-rich_rpt 940 962
IPR002182 NB-ARC 192 425
IPR000157 TIR_dom 12 190
IPR011713 Leu-rich_rpt_3 894 913
IPR011713 Leu-rich_rpt_3 734 753
IPR011713 Leu-rich_rpt_3 597 615
No external refs found!