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  5. Seita.2G368600.1

Seita.2G368600.1


Description : HD-ZIP I/II-type transcription factor


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G368600.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Bradi4g32737 No alias homeobox protein 16 0.02 Orthogroups_2024-Update
Brara.A00197.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G01237.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.11G242200 No alias homeobox protein 6 0.02 Orthogroups_2024-Update
Glyma.16G021000 No alias homeobox 7 0.02 Orthogroups_2024-Update
Glyma.19G189700 No alias homeobox 51 0.03 Orthogroups_2024-Update
Kfl00466_0010 kfl00466_0010_v1.1 (at3g01470 : 93.2) Encodes a homeodomain leucine zipper... 0.01 Orthogroups_2024-Update
Potri.002G176300 No alias homeobox 7 0.03 Orthogroups_2024-Update
Potri.012G070900 No alias homeobox 1 0.02 Orthogroups_2024-Update
Pp1s154_145V6 No alias af402605_1homeodomain leucine zipper protein hdz2 0.02 Orthogroups_2024-Update
Sobic.004G300300.1 No alias HD-ZIP I/II-type transcription factor 0.01 Orthogroups_2024-Update
Solyc02g087840 No alias Homeobox associated leucine zipper protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 58 111
No external refs found!