Seita.2G374400.1


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G374400.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
At4g01820 No alias ABC transporter B family member 3... 0.07 Orthogroups_2024-Update
HORVU3Hr1G068650.8 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
PSME_00037733-RA No alias (at3g28345 : 1445.0) ABC transporter family protein;... 0.03 Orthogroups_2024-Update
Seita.5G282700.1 No alias subfamily ABCB transporter 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 682 954
IPR011527 ABC1_TM_dom 41 307
IPR003439 ABC_transporter-like 1023 1171
IPR003439 ABC_transporter-like 383 529
No external refs found!