1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.2G403600.1

Seita.2G403600.1


Description : pre-40S ribosomal-subunit proteome nuclear export factor *(Ltv1)


Gene families : OG_42_0004945 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004945_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G403600.1
Cluster HCAA Clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Bradi1g61380 No alias Function unknown 0.02 Orthogroups_2024-Update
Cre02.g146000 No alias Function unknown 0.01 Orthogroups_2024-Update
Mp8g15770.1 No alias Ltv1 pre-40S subunit nuclear export factor 0.02 Orthogroups_2024-Update
Pp1s306_41V6 No alias F3A4.70; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!