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  5. Seita.2G404100.1

Seita.2G404100.1


Description : MYB class-R2R3 subgroup-13 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G404100.1

Target Alias Description ECC score Gene Family Method Actions
39499 No alias myb domain protein 13 0.03 Orthogroups_2024-Update
93784 No alias myb domain protein 97 0.06 Orthogroups_2024-Update
A4A49_12018 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
A4A49_24145 No alias transcription factor myb108 0.05 Orthogroups_2024-Update
A4A49_28008 No alias transcription repressor myb5 0.02 Orthogroups_2024-Update
A4A49_41919 No alias myb-related protein myb4 0.02 Orthogroups_2024-Update
At1g18570 No alias Transcription factor MYB51... 0.04 Orthogroups_2024-Update
At1g79180 No alias myb domain protein 63 [Source:TAIR;Acc:AT1G79180] 0.03 Orthogroups_2024-Update
At4g21440 No alias Transcription factor MYB102... 0.05 Orthogroups_2024-Update
At4g28110 No alias MYB41 [Source:UniProtKB/TrEMBL;Acc:A0A178V452] 0.03 Orthogroups_2024-Update
Bradi2g05740 No alias myb domain protein 37 0.06 Orthogroups_2024-Update
Bradi2g47590 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Bradi3g49180 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Bradi4g09490 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Bradi4g22637 No alias myb domain protein 94 0.06 Orthogroups_2024-Update
Bradi4g36210 No alias myb domain protein 85 0.03 Orthogroups_2024-Update
Brara.A03255.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.D01882.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Brara.G02266.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.H01124.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G084583 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
GRMZM2G093789 No alias myb domain protein 101 0.03 Orthogroups_2024-Update
GRMZM2G395672 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Glyma.02G110100 No alias myb domain protein 106 0.03 Orthogroups_2024-Update
Glyma.04G170100 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Glyma.04G205100 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.04 Orthogroups_2024-Update
Glyma.06G003800 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.06G300300 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.07G189300 No alias MYB-like 102 0.05 Orthogroups_2024-Update
Glyma.08G336500 No alias myb domain protein 103 0.06 Orthogroups_2024-Update
Glyma.12G237500 No alias myb domain protein 83 0.07 Orthogroups_2024-Update
Glyma.13G050400 No alias myb domain protein 83 0.05 Orthogroups_2024-Update
Glyma.15G041100 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.19G257400 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.20G082300 No alias myb domain protein 79 0.04 Orthogroups_2024-Update
HORVU1Hr1G041280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G051980.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.04 Orthogroups_2024-Update
LOC_Os02g46780 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g41166 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g36250 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_139924g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_1589g0010 No alias (at1g63910 : 241.0) member of MYB3R- and R2R3- type MYB-... 0.02 Orthogroups_2024-Update
MA_199974g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.05 Orthogroups_2024-Update
PSME_00027930-RA No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00041780-RA No alias (at4g38620 : 265.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00042627-RA No alias (at3g61250 : 265.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00052005-RA No alias (at3g02940 : 213.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Potri.002G038500 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Potri.003G155700 No alias myb domain protein 67 0.05 Orthogroups_2024-Update
Potri.007G093900 No alias myb domain protein 92 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.04 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Potri.009G007100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Potri.011G167600 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Seita.5G028900.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Seita.7G179800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G397900.1 No alias MYB class-R2R3 subgroup-7 transcription factor 0.06 Orthogroups_2024-Update
Sobic.002G388700.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.05 Orthogroups_2024-Update
Sobic.003G267400.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G155900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.07 Orthogroups_2024-Update
Sobic.007G177100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc11g072060 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PSR6_SALMI) 0.03 Orthogroups_2024-Update
Sopen01g001670 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen02g024100 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g018710 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen10g001230 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g029710 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!