1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.2G419000.1

Seita.2G419000.1


Description : Unknown function


Gene families : OG_42_0001270 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001270_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G419000.1
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
155351 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
At2g41250 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily... 0.06 Orthogroups_2024-Update
Bradi1g19010 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.04 Orthogroups_2024-Update
Brara.D02514.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Cre09.g403750 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G440459 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.06 Orthogroups_2024-Update
GRMZM5G898740 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G130300 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os07g46520 No alias rhythmically expressed gene 2 protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_962052g0010 No alias (at2g41250 : 337.0) Haloacid dehalogenase-like hydrolase... 0.03 Orthogroups_2024-Update
PSME_00044252-RA No alias (at2g41250 : 380.0) Haloacid dehalogenase-like hydrolase... 0.02 Orthogroups_2024-Update
Potri.006G040800 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.04 Orthogroups_2024-Update
Sobic.002G403600.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Solyc10g079620 No alias haloacid dehalogenase 0.06 Orthogroups_2024-Update
Sopen10g030260 No alias Haloacid dehalogenase-like hydrolase 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!