Seita.2G425600.1


Description : lipid droplet-associated factor *(LDAP)


Gene families : OG_42_0001183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001183_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G425600.1
Cluster HCAA Clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Bradi2g35600 No alias Rubber elongation factor protein (REF) 0.02 Orthogroups_2024-Update
Brara.B01718.1 No alias lipid droplet-associated factor *(LDAP) 0.04 Orthogroups_2024-Update
Brara.G02575.1 No alias lipid droplet-associated factor *(LDAP) 0.04 Orthogroups_2024-Update
Glyma.08G104200 No alias Rubber elongation factor protein (REF) 0.02 Orthogroups_2024-Update
Glyma.11G250500 No alias Rubber elongation factor protein (REF) 0.02 Orthogroups_2024-Update
Glyma.18G006700 No alias Rubber elongation factor protein (REF) 0.03 Orthogroups_2024-Update
HORVU2Hr1G019790.11 No alias lipid droplet-associated factor *(LDAP) 0.03 Orthogroups_2024-Update
Kfl00024_0290 kfl00024_0290_v1.1 (at2g47780 : 98.6) Rubber elongation factor protein... 0.02 Orthogroups_2024-Update
LOC_Os05g05940 No alias stress-related protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g47510 No alias stress-related protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10431316g0010 No alias (at3g05500 : 184.0) Rubber elongation factor protein... 0.04 Orthogroups_2024-Update
Mp4g15940.1 No alias associated factor (LDAP) 0.02 Orthogroups_2024-Update
PSME_00039672-RA No alias (at3g05500 : 184.0) Rubber elongation factor protein... 0.04 Orthogroups_2024-Update
PSME_00041031-RA No alias (at3g05500 : 163.0) Rubber elongation factor protein... 0.03 Orthogroups_2024-Update
Sobic.002G412800.1 No alias lipid droplet-associated factor *(LDAP) 0.07 Orthogroups_2024-Update
Solyc01g099680 No alias Rubber elongation factor protein, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen05g010680 No alias Rubber elongation factor protein (REF) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008802 REF 26 246
No external refs found!