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  5. Seita.2G436900.1

Seita.2G436900.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G436900.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
405399 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
A4A49_31971 No alias myb family transcription factor phl11 0.02 Orthogroups_2024-Update
A4A49_41088 No alias myb family transcription factor phl5 0.03 Orthogroups_2024-Update
Bradi4g29700 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B03508.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
GRMZM2G069525 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G242100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G003500 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.09G171100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G211900 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G051080.3 No alias GARP subgroup PHL transcription factor & transcription... 0.04 Orthogroups_2024-Update
HORVU5Hr1G054350.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G070420.7 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g47890 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g25710 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.001G280000 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Pp1s47_90V6 No alias at3g24120 muj8_3 0.03 Orthogroups_2024-Update
Seita.6G053400.1 No alias KANADI-type transcription factor 0.04 Orthogroups_2024-Update
Solyc05g055940 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 44 95
IPR025756 Myb_CC_LHEQLE 143 189
No external refs found!