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  5. Seita.2G438900.1

Seita.2G438900.1


Description : regulatory subunit beta of SnRK1 kinase complex & regulatory subunit beta of SNF1-related SnRK1 kinase complex


Gene families : OG_42_0001630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001630_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G438900.1
Cluster HCAA Clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
A4A49_04018 No alias snf1-related protein kinase regulatory subunit beta-1 0.02 Orthogroups_2024-Update
HORVU2Hr1G016730.1 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.02 Orthogroups_2024-Update
evm.model.tig00000704.53 No alias (at4g16360 : 94.4) 5'-AMP-activated protein kinase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006828 ASC_dom 207 274
IPR032640 AMPK1_CBM 94 173
No external refs found!