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  5. Seita.2G439800.1

Seita.2G439800.1


Description : Unknown function


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G439800.1
Cluster HCAA Clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
At5g41400 No alias Putative RING zinc finger protein... 0.03 Orthogroups_2024-Update
MA_10433991g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_8362328g0010 No alias (at2g04240 : 118.0) Encodes a small protein with an... 0.03 Orthogroups_2024-Update
Mp4g04600.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.001G450700 No alias brassinosteroid-responsive RING-H2 0.04 Orthogroups_2024-Update
Potri.007G086100 No alias receptor homology region transmembrane domain ring H2... 0.02 Orthogroups_2024-Update
Sopen08g003950 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 143
No external refs found!