Seita.3G003000.1

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G003000.1
Cluster	HCAA Clusters: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
104940	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Brara.A03785.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Glyma.02G050100	No alias	vascular related NAC-domain protein 1	0.03	Orthogroups_2024-Update
Glyma.05G234200	No alias	NAC domain containing protein 58	0.03	Orthogroups_2024-Update
Glyma.12G186851	No alias	NTM1-like 8	0.03	Orthogroups_2024-Update
Glyma.16G042900	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
Glyma.16G130200	No alias	vascular related NAC-domain protein 1	0.02	Orthogroups_2024-Update
Glyma.20G192500	No alias	NAC domain containing protein 52	0.03	Orthogroups_2024-Update
MA_15204g0010	No alias	(at3g03200 : 250.0) NAC domain containing protein 45...	0.03	Orthogroups_2024-Update
Seita.5G403000.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G112200.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.007G003000.1	No alias	NAC-type transcription factor	0.07	Orthogroups_2024-Update
Solyc02g084350	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc03g078120	No alias	NAC domain protein, (AHRD V3.3 - A0A061FNG1_THECC)	0.03	Orthogroups_2024-Update
Solyc08g077110	No alias	NAC domain protein, (AHRD V3.3 *** A0A061GAH7_THECC)	0.02	Orthogroups_2024-Update
Sopen02g025910	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update
Sopen10g001020	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0003777	microtubule motor activity	IEP	Predicted GO
BP	GO:0006928	movement of cell or subcellular component	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
BP	GO:0007018	microtubule-based movement	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	28	164

External Links

No external refs found!

Seita.3G003000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation