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  5. Seita.3G004500.1

Seita.3G004500.1


Description : microtubule-interacting component *(CC) of cellulose synthase complex


Gene families : OG_42_0000892 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G004500.1
Cluster HCAA Clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
75450 No alias Function unknown 0.04 Orthogroups_2024-Update
A4A49_26766 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g45688 No alias Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9C636] 0.05 Orthogroups_2024-Update
At2g41990 No alias At2g41990 [Source:UniProtKB/TrEMBL;Acc:P93747] 0.03 Orthogroups_2024-Update
GRMZM2G342243 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.13G357632 No alias Late embryogenesis abundant protein, group 2 0.01 Orthogroups_2024-Update
Glyma.15G015800 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU2Hr1G125280.1 No alias microtubule-interacting component *(CC) of cellulose... 0.03 Orthogroups_2024-Update
LOC_Os01g12820 No alias harpin-induced protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g12850.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
PSME_00009955-RA No alias (at1g45688 : 172.0) unknown protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00052532-RA No alias (at1g45688 : 303.0) unknown protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.001G183600 No alias Function unknown 0.05 Orthogroups_2024-Update
Potri.002G124600 No alias Function unknown 0.05 Orthogroups_2024-Update
Potri.003G052900 No alias Function unknown 0.04 Orthogroups_2024-Update
Pp1s126_137V6 No alias MBD2.5; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Sobic.006G278100.1 No alias microtubule-interacting component *(CC) of cellulose... 0.04 Orthogroups_2024-Update
Solyc03g120710 No alias Late embryogenesis abundant protein (AHRD V3.3 *** G7II20_MEDTR) 0.05 Orthogroups_2024-Update
Solyc04g078750 No alias Late embryogenesis abundant protein (AHRD V3.3 *** G7LCF7_MEDTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!