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  5. Seita.3G005400.1

Seita.3G005400.1


Description : TUB-type transcription factor


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G005400.1
Cluster HCAA Clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
83983 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
85745 No alias tubby like protein 3 0.02 Orthogroups_2024-Update
At5g18680 No alias Uncharacterized protein At5g18680 (Fragment)... 0.02 Orthogroups_2024-Update
Bradi2g56070 No alias tubby like protein 10 0.02 Orthogroups_2024-Update
GRMZM2G062154 No alias tubby like protein 7 0.03 Orthogroups_2024-Update
GRMZM2G108228 No alias tubby like protein 10 0.03 Orthogroups_2024-Update
HORVU1Hr1G074940.1 No alias TUB-type transcription factor 0.04 Orthogroups_2024-Update
HORVU5Hr1G040000.2 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os04g59130 No alias OsFBT6 - F-box and tubby domain containing protein, expressed 0.04 Orthogroups_2024-Update
Seita.2G422900.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G148500.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G227800.1 No alias TUB-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000007 Tubby_C 112 433
IPR001810 F-box_dom 51 98
No external refs found!