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  5. Seita.3G008400.1

Seita.3G008400.1


Description : A1-class (Pepsin) protease


Gene families : OG_42_0002452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G008400.1
Cluster HCAA Clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
A4A49_41469 No alias putative aspartyl protease 0.02 Orthogroups_2024-Update
Bradi5g26620 No alias Eukaryotic aspartyl protease family protein 0.04 Orthogroups_2024-Update
PSME_00031268-RA No alias (at3g52500 : 296.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00031269-RA No alias (at3g52500 : 173.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00033945-RA No alias (at3g52500 : 214.0) Eukaryotic aspartyl protease family... 0.01 Orthogroups_2024-Update
PSME_00055318-RA No alias (at3g52500 : 155.0) Eukaryotic aspartyl protease family... 0.01 Orthogroups_2024-Update
PSME_00056214-RA No alias (at3g52500 : 210.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00056511-RA No alias (at3g52500 : 284.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032799 TAXi_C 333 510
IPR032861 TAXi_N 133 305
No external refs found!