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  5. At4g17950

At4g17950


Description : AT-hook motif nuclear-localized protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q940I0]


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g17950
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
At5g51590 No alias AT-hook motif nuclear-localized protein 4... 0.03 Orthogroups_2024-Update
Bradi3g13871 No alias AT-hook motif nuclear-localized protein 1 0.03 Orthogroups_2024-Update
Brara.I01943.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Glyma.05G111800 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Solyc03g007150 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc08g008030 No alias AT hook motif DNA-binding family protein, putative (AHRD... 0.03 Orthogroups_2024-Update
Sopen03g003140 No alias Domain of unknown function (DUF296) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 222 339
No external refs found!