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  5. Seita.3G016700.1

Seita.3G016700.1


Description : X-type thioredoxin *(Trx-X)


Gene families : OG_42_0000653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G016700.1
Cluster HCAA Clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
At4g03520 No alias Thioredoxin M2, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi4g40800 No alias thioredoxin M-type 4 0.03 Orthogroups_2024-Update
Brara.F00316.1 No alias X-type thioredoxin *(Trx-X) 0.03 Orthogroups_2024-Update
GRMZM2G181258 No alias thioredoxin M-type 4 0.04 Orthogroups_2024-Update
HORVU2Hr1G075240.5 No alias thioredoxin *(TRX-M) 0.04 Orthogroups_2024-Update
HORVU5Hr1G033050.1 No alias thioredoxin *(TRX-M) 0.05 Orthogroups_2024-Update
HORVU5Hr1G033060.1 No alias thioredoxin *(TRX-M) 0.05 Orthogroups_2024-Update
LOC_Os04g57930 No alias thioredoxin, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G073000 No alias thioredoxin M-type 4 0.03 Orthogroups_2024-Update
Pp1s8_193V6 No alias thioredoxin x 0.02 Orthogroups_2024-Update
Sobic.006G265900.1 No alias X-type thioredoxin *(Trx-X) 0.05 Orthogroups_2024-Update
Solyc12g013810 No alias Thioredoxin (AHRD V3.3 *** A0A103YK44_CYNCS) 0.03 Orthogroups_2024-Update
evm.model.contig_2075.4 No alias (p23400|trxm_chlre : 102.0) Thioredoxin M-type,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 68 166
No external refs found!