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  5. Seita.3G016900.1

Seita.3G016900.1


Description : Unknown function


Gene families : OG_42_0008756 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008756_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G016900.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AC212835.3_FG001 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g26190 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G137566 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Sobic.009G127600.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 65 89
IPR002885 Pentatricopeptide_repeat 489 509
IPR002885 Pentatricopeptide_repeat 344 392
IPR002885 Pentatricopeptide_repeat 238 287
IPR002885 Pentatricopeptide_repeat 97 143
IPR002885 Pentatricopeptide_repeat 443 471
IPR002885 Pentatricopeptide_repeat 165 197
No external refs found!