1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G033000.1

Seita.3G033000.1


Description : EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G033000.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
At1g29110 No alias Cysteine proteinases superfamily protein... 0.03 Orthogroups_2024-Update
Brara.B02488.1 No alias C1-class subclass RD21/XCP thiol protease & EC_3.4... 0.03 Orthogroups_2024-Update
GRMZM2G166281 No alias Granulin repeat cysteine protease family protein 0.02 Orthogroups_2024-Update
Glyma.04G014700 No alias xylem cysteine peptidase 2 0.02 Orthogroups_2024-Update
Glyma.05G096800 No alias Granulin repeat cysteine protease family protein 0.03 Orthogroups_2024-Update
Pp1s369_30V6 No alias cysteine protease 0.02 Orthogroups_2024-Update
Sopen04g032140 No alias Papain family cysteine protease 0.02 Orthogroups_2024-Update
Sopen04g034460 No alias Papain family cysteine protease 0.03 Orthogroups_2024-Update
Sopen12g030570 No alias Papain family cysteine protease 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA 16Dec
MF GO:0008234 cysteine-type peptidase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 102 305
No external refs found!