At4g18170

Description : WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g18170
Cluster	HCCA clusters: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03410	No alias	putative wrky transcription factor 9	0.03	Orthogroups_2024-Update
A4A49_13674	No alias	putative wrky transcription factor 48	0.02	Orthogroups_2024-Update
A4A49_19262	No alias	putative wrky transcription factor 40	0.04	Orthogroups_2024-Update
A4A49_24743	No alias	putative wrky transcription factor 20	0.04	Orthogroups_2024-Update
A4A49_40108	No alias	putative wrky transcription factor 51	0.06	Orthogroups_2024-Update
AC205562.3_FG002	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
AC209050.3_FG003	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
At1g30650	No alias	Probable WRKY transcription factor 14...	0.04	Orthogroups_2024-Update
At1g80590	No alias	Probable WRKY transcription factor 66...	0.03	Orthogroups_2024-Update
At2g40740	No alias	WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]	0.04	Orthogroups_2024-Update
At3g58710	No alias	WRKY69 [Source:UniProtKB/TrEMBL;Acc:A0A178V7K8]	0.06	Orthogroups_2024-Update
At4g23810	No alias	Probable WRKY transcription factor 53...	0.03	Orthogroups_2024-Update
At5g07100	No alias	Probable WRKY transcription factor 26...	0.06	Orthogroups_2024-Update
At5g46350	No alias	Probable WRKY transcription factor 8...	0.05	Orthogroups_2024-Update
Bradi1g30870	No alias	WRKY DNA-binding protein 18	0.03	Orthogroups_2024-Update
Bradi2g15877	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Bradi2g49906	No alias	WRKY DNA-binding protein 65	0.03	Orthogroups_2024-Update
Bradi3g57710	No alias	WRKY DNA-binding protein 9	0.03	Orthogroups_2024-Update
Brara.B01768.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F01311.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F02781.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00205.1	No alias	WRKY-type transcription factor	0.06	Orthogroups_2024-Update
Brara.K00397.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G012724	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
GRMZM2G015433	No alias	WRKY DNA-binding protein 56	0.03	Orthogroups_2024-Update
GRMZM2G018721	No alias	WRKY DNA-binding protein 57	0.03	Orthogroups_2024-Update
GRMZM2G025895	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G036703	No alias	WRKY DNA-binding protein 2	0.02	Orthogroups_2024-Update
GRMZM2G111711	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
GRMZM2G411766	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
GRMZM5G812272	No alias	WRKY DNA-binding protein 28	0.03	Orthogroups_2024-Update
Glyma.02G020300	No alias	WRKY DNA-binding protein 72	0.02	Orthogroups_2024-Update
Glyma.02G232600	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.05G029000	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.06G054500	No alias	WRKY DNA-binding protein 50	0.03	Orthogroups_2024-Update
Glyma.06G125600	No alias	WRKY DNA-binding protein 30	0.03	Orthogroups_2024-Update
Glyma.07G023300	No alias	WRKY DNA-binding protein 40	0.05	Orthogroups_2024-Update
Glyma.08G011300	No alias	WRKY DNA-binding protein 75	0.04	Orthogroups_2024-Update
Glyma.09G280200	No alias	WRKY DNA-binding protein 33	0.04	Orthogroups_2024-Update
Glyma.14G200200	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.17G097900	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.17G224800	No alias	WRKY DNA-binding protein 50	0.05	Orthogroups_2024-Update
Glyma.19G221700	No alias	WRKY family transcription factor	0.05	Orthogroups_2024-Update
HORVU1Hr1G088300.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU1Hr1G090170.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU3Hr1G020210.2	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU3Hr1G071750.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G124320.9	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G013890.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G067680.3	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU7Hr1G049130.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g40430	No alias	WRKY27, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g55080	No alias	WRKY3, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g49210	No alias	WRKY43, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g16510	No alias	WRKY74, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g02420	No alias	WRKY97, expressed	0.03	Orthogroups_2024-Update
MA_103616g0010	No alias	(at4g22070 : 256.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_114793g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_23415g0010	No alias	(at5g26170 : 117.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_53351g0010	No alias	(at5g56270 : 326.0) WRKY transcription factor 2; WRKY...	0.03	Orthogroups_2024-Update
MA_91468g0010	No alias	(at4g01720 : 124.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00000342-RA	No alias	(at1g29280 : 114.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00001545-RA	No alias	(at1g29860 : 137.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00023521-RA	No alias	(at1g29860 : 108.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00033789-RA	No alias	(at2g38470 : 152.0) Member of the plant WRKY...	0.06	Orthogroups_2024-Update
PSME_00035861-RA	No alias	(at3g01970 : 109.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00036209-RA	No alias	(at4g01720 : 157.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00036210-RA	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.04	Orthogroups_2024-Update
PSME_00039002-RA	No alias	(at5g26170 : 112.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00048777-RA	No alias	(at4g23810 : 118.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00051212-RA	No alias	(at4g11070 : 110.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00051522-RA	No alias	(at2g34830 : 207.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.001G044500	No alias	WRKY DNA-binding protein 40	0.04	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Potri.002G228400	No alias	WRKY family transcription factor	0.05	Orthogroups_2024-Update
Potri.006G105300	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Potri.006G133200	No alias	WRKY family transcription factor family protein	0.04	Orthogroups_2024-Update
Potri.007G079800	No alias	WRKY DNA-binding protein 51	0.02	Orthogroups_2024-Update
Potri.008G091900	No alias	WRKY DNA-binding protein 4	0.02	Orthogroups_2024-Update
Potri.011G007800	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.015G064100	No alias	WRKY DNA-binding protein 72	0.04	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.04	Orthogroups_2024-Update
Potri.016G137900	No alias	WRKY DNA-binding protein 70	0.04	Orthogroups_2024-Update
Pp1s13_381V6	No alias	No description available	0.03	Orthogroups_2024-Update
Pp1s235_126V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.03	Orthogroups_2024-Update
Pp1s244_77V6	No alias	transcription factor WRKY21	0.02	Orthogroups_2024-Update
Pp1s39_217V6	No alias	wrky transcription	0.04	Orthogroups_2024-Update
Seita.1G062100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.2G157800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.2G206000.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G132700.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G294500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G306000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.7G301900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.7G302000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.8G123100.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.9G084400.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.9G413200.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G421700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G174300.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G276000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G285500.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Sobic.003G296300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G341100.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G065900.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Sobic.005G013500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G118301.1	No alias	WRKY-type transcription factor	0.06	Orthogroups_2024-Update
Sobic.009G068900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G092100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G100500.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G209100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc01g079260	No alias	WRKY transcription factor 23	0.02	Orthogroups_2024-Update
Solyc01g089960	No alias	WRKY transcription factor 12	0.05	Orthogroups_2024-Update
Solyc01g095100	No alias	WRKY transcription factor 22	0.04	Orthogroups_2024-Update
Solyc03g095770	No alias	WRKY transcription factor 80	0.05	Orthogroups_2024-Update
Solyc03g116890	No alias	WRKY transcription factor 39	0.04	Orthogroups_2024-Update
Solyc04g051690	No alias	WRKY transcription factor 51	0.02	Orthogroups_2024-Update
Solyc04g072070	No alias	WRKY transcription factor 55	0.02	Orthogroups_2024-Update
Solyc08g067360	No alias	WRKY transcription factor 45	0.03	Orthogroups_2024-Update
Solyc08g082110	No alias	WRKY transcription factor 54	0.04	Orthogroups_2024-Update
Solyc09g014990	No alias	WRKY transcription factor 33	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006595	polyamine metabolic process	IEP	Predicted GO
BP	GO:0006596	polyamine biosynthetic process	IEP	Predicted GO
BP	GO:0006597	spermine biosynthetic process	IEP	Predicted GO
BP	GO:0008215	spermine metabolic process	IEP	Predicted GO
BP	GO:0008216	spermidine metabolic process	IEP	Predicted GO
BP	GO:0008295	spermidine biosynthetic process	IEP	Predicted GO
BP	GO:0009308	amine metabolic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
BP	GO:0097164	ammonium ion metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	172	229

External Links

No external refs found!

At4g18170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation