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  5. Seita.3G034900.1

Seita.3G034900.1


Description : EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO)


Gene families : OG_42_0001102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G034900.1
Cluster HCAA Clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Bradi5g24430 No alias endonuclease 2 0.03 Orthogroups_2024-Update
Brara.G02776.1 No alias EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO) 0.04 Orthogroups_2024-Update
GRMZM2G041352 No alias endonuclease 2 0.04 Orthogroups_2024-Update
PSME_00037308-RA No alias (at4g21585 : 342.0) Encodes a putative endonuclease but... 0.03 Orthogroups_2024-Update
Seita.5G087400.1 No alias EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO) 0.05 Orthogroups_2024-Update
Sobic.003G087300.1 No alias EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0004519 endonuclease activity IEA 16Dec
BP GO:0006308 DNA catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003154 S1/P1nuclease 24 279
No external refs found!