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  5. Seita.3G042600.1

Seita.3G042600.1


Description : subfamily ABCG transporter & jasmonic acid transporter *(JAT)


Gene families : OG_42_0001141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G042600.1
Cluster HCAA Clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
At5g13580 No alias ABC transporter G family member 6... 0.03 Orthogroups_2024-Update
GRMZM2G474658 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G058070.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.03 Orthogroups_2024-Update
MA_10432886g0010 No alias (at2g37360 : 717.0) ABC-2 type transporter family... 0.05 Orthogroups_2024-Update
PSME_00014750-RA No alias (at3g53510 : 743.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update
Seita.9G447400.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 73 225
IPR013525 ABC_2_trans 385 594
No external refs found!