1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G055300.1

Seita.3G055300.1


Description : Unknown function


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G055300.1
Cluster HCAA Clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
443112 No alias basic chitinase 0.02 Orthogroups_2024-Update
A4A49_18672 No alias basic 30 kda endochitinase 0.03 Orthogroups_2024-Update
GRMZM2G103668 No alias basic chitinase 0.03 Orthogroups_2024-Update
HORVU1Hr1G017670.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_8921185g0010 No alias (q9frv0|chic_secce : 129.0) Basic endochitinase C... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA 16Dec
BP GO:0006032 chitin catabolic process IEA 16Dec
BP GO:0016998 cell wall macromolecule catabolic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 73 306
No external refs found!