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  5. Seita.3G055700.1

Seita.3G055700.1


Description : regulatory protein *(PIF) of red/far-red light perception & bHLH-type transcription factor


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G055700.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
118904 No alias phytochrome interacting factor 3 0.02 Orthogroups_2024-Update
Bradi2g11100 No alias phytochrome interacting factor 3 0.03 Orthogroups_2024-Update
Brara.F00609.1 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
GRMZM2G042920 No alias phytochrome interacting factor 3 0.03 Orthogroups_2024-Update
Glyma.03G170300 No alias phytochrome interacting factor 3-like 5 0.03 Orthogroups_2024-Update
Glyma.08G303900 No alias phytochrome interacting factor 4 0.03 Orthogroups_2024-Update
HORVU2Hr1G060680.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
LOC_Os04g52770 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.002G124400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s68_85V6 No alias dna binding 0.02 Orthogroups_2024-Update
Sobic.008G163700.3 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
Sopen09g025180 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004668 protein-arginine deiminase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009445 putrescine metabolic process IEP Predicted GO
BP GO:0009446 putrescine biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 400 446
No external refs found!