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  5. Seita.3G055800.1

Seita.3G055800.1


Description : MYB class-R2R3 subgroup-13 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G055800.1
Cluster HCAA Clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
A4A49_00243 No alias transcription factor myb39 0.02 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
A4A49_08715 No alias myb-related protein pp2 0.02 Orthogroups_2024-Update
A4A49_12018 No alias transcription factor myb30 0.04 Orthogroups_2024-Update
A4A49_12817 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_27195 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_31893 No alias transcription factor myb36 0.04 Orthogroups_2024-Update
A4A49_33530 No alias transcription factor myb26 0.03 Orthogroups_2024-Update
A4A49_34066 No alias transcription factor rax3 0.02 Orthogroups_2024-Update
A4A49_34201 No alias transcription factor myb82 0.03 Orthogroups_2024-Update
At1g48000 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3] 0.04 Orthogroups_2024-Update
At3g13540 No alias MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4] 0.02 Orthogroups_2024-Update
At5g23000 No alias Transcription factor RAX1... 0.02 Orthogroups_2024-Update
At5g52260 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5] 0.05 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.03 Orthogroups_2024-Update
Bradi2g46770 No alias myb domain protein 87 0.02 Orthogroups_2024-Update
Bradi2g56520 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Bradi3g17165 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Bradi4g36210 No alias myb domain protein 85 0.04 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Brara.B03395.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.I01367.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.I02176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G001223 No alias myb domain protein 106 0.03 Orthogroups_2024-Update
GRMZM2G117244 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
GRMZM2G131442 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
GRMZM2G160838 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G431156 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.12G032200 No alias myb domain protein 32 0.03 Orthogroups_2024-Update
Glyma.12G066000 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Glyma.12G104800 No alias myb domain protein 14 0.04 Orthogroups_2024-Update
Glyma.12G177700 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
Glyma.17G099800 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.17G158000 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.19G248100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
HORVU0Hr1G006810.2 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G092820.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G028310.12 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G054420.3 No alias MYB class-R2R3 subgroup-7 transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G079580.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g18240 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g15020 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_128244g0010 No alias (at3g61250 : 275.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_190973g0010 No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
MA_53373g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.05 Orthogroups_2024-Update
PSME_00042064-RA No alias (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
PSME_00043973-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00050855-RA No alias "(at2g47460 : 188.0) ""MYB12 belongs to subgroup 7 of... 0.04 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.005G096600 No alias myb domain protein 63 0.04 Orthogroups_2024-Update
Potri.006G221200 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.006G221500 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G141000 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Potri.011G167600 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Potri.013G109300 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.015G041100 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.019G036400 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
Potri.019G045900 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Seita.3G062200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G274200.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G273800.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G303600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Sobic.008G187001.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G016633.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Solyc06g005330 No alias R2R3MYB transcription factor 59 0.03 Orthogroups_2024-Update
Solyc11g065840 No alias R2R3MYB transcription factor 46 0.03 Orthogroups_2024-Update
Solyc11g069030 No alias blind 0.03 Orthogroups_2024-Update
Solyc12g099120 No alias Abscisic acid induced MYB1 0.02 Orthogroups_2024-Update
Sopen03g001570 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen03g004680 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g023610 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g029710 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 110
No external refs found!