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  5. Seita.3G071400.1

Seita.3G071400.1


Description : pathogen polygalacturonase inhibitor *(PGIP)


Gene families : OG_42_0000642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G071400.1
Cluster HCAA Clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
At1g33670 No alias Leucine-rich repeat (LRR) family protein... 0.05 Orthogroups_2024-Update
Brara.C00272.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.02 Orthogroups_2024-Update
Brara.J02539.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.02 Orthogroups_2024-Update
LOC_Os05g01370 No alias polygalacturonase inhibitor precursor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.006G058600 No alias polygalacturonase inhibiting protein 1 0.03 Orthogroups_2024-Update
Seita.2G357900.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.02 Orthogroups_2024-Update
Seita.3G071700.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.04 Orthogroups_2024-Update
Sobic.001G330500.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.009G002400.2 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 31 68
No external refs found!