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  5. Seita.3G074200.1

Seita.3G074200.1


Description : Unknown function


Gene families : OG_42_0008911 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008911_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G074200.1
Cluster HCAA Clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Bradi2g32660 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Brara.H00135.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.06G227700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
Potri.011G108500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 Orthogroups_2024-Update
Sobic.002G257600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen12g006110 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 263 292
IPR002885 Pentatricopeptide_repeat 152 201
IPR002885 Pentatricopeptide_repeat 295 344
IPR002885 Pentatricopeptide_repeat 361 394
IPR002885 Pentatricopeptide_repeat 220 251
No external refs found!