1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G076100.1

Seita.3G076100.1


Description : class-C endo-1,4-beta-glucanase


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G076100.1
Cluster HCAA Clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Bradi4g35970 No alias glycosyl hydrolase 9B18 0.03 Orthogroups_2024-Update
Brara.G01131.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G048165 No alias glycosyl hydrolase 9B18 0.03 Orthogroups_2024-Update
GRMZM2G538064 No alias glycosyl hydrolase 9A4 0.03 Orthogroups_2024-Update
Glyma.09G231800 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
HORVU7Hr1G075970.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g13830 No alias endoglucanase, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g20540.1 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00036164-RA No alias (at1g48930 : 712.0) glycosyl hydrolase 9C1 (GH9C1);... 0.03 Orthogroups_2024-Update
Potri.001G083200 No alias cellulase 2 0.03 Orthogroups_2024-Update
Pp1s149_10V6 No alias endo-beta- -glucanase 0.03 Orthogroups_2024-Update
Pp1s376_19V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Pp1s37_355V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Seita.3G050200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g081300 No alias Endoglucanase (AHRD V3.3 *** K4BVK9_SOLLC) 0.03 Orthogroups_2024-Update
Solyc11g040340 No alias LEE14BDGL L.esculentum endo-1,4-beta-D-glucanase 0.02 Orthogroups_2024-Update
Sopen01g052490 No alias Glycosyl hydrolase family 9 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
MF GO:0030246 carbohydrate binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 30 486
IPR019028 CBM_49 530 607
No external refs found!