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  5. Seita.3G080300.1

Seita.3G080300.1


Description : Unknown function


Gene families : OG_42_0002860 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002860_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G080300.1

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G099678 No alias Phosphorylase superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G052510.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.019G050200 No alias Phosphorylase superfamily protein 0.03 Orthogroups_2024-Update
Potri.T096300 No alias Phosphorylase superfamily protein 0.03 Orthogroups_2024-Update
Sobic.009G084300.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
BP GO:0009116 nucleoside metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000845 Nucleoside_phosphorylase_d 45 346
No external refs found!