Description : component *(uL16) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0001900 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001900_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.3G099700.1 | |
Cluster | HCAA Clusters: Cluster_170 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
437527 | No alias | Ribosomal protein L16p/L10e family protein | 0.04 | Orthogroups_2024-Update | |
Bradi2g34440 | No alias | Ribosomal protein L16p/L10e family protein | 0.02 | Orthogroups_2024-Update | |
Brara.F00957.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Brara.G02907.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G024710.2 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
PSME_00015731-RA | No alias | (p93847|rl10_solme : 394.0) 60S ribosomal protein L10... | 0.03 | Orthogroups_2024-Update | |
Sobic.001G177800.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.004G103700.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Solyc06g007520 | No alias | 60S ribosomal protein L10 (AHRD V3.3 *** RL10_SOLME) | 0.03 | Orthogroups_2024-Update | |
Solyc06g082650 | No alias | 60S ribosomal protein L10 (AHRD V3.3 *** RL10_SOLME) | 0.03 | Orthogroups_2024-Update | |
Solyc06g082670 | No alias | 60S ribosomal protein L10 (AHRD V3.3 *** RL10_SOLME) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
BP | GO:0006486 | protein glycosylation | IEP | Predicted GO |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
BP | GO:0018196 | peptidyl-asparagine modification | IEP | Predicted GO |
BP | GO:0018279 | protein N-linked glycosylation via asparagine | IEP | Predicted GO |
MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030118 | clathrin coat | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030125 | clathrin vesicle coat | IEP | Predicted GO |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Predicted GO |
CC | GO:0030132 | clathrin coat of coated pit | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
BP | GO:0043413 | macromolecule glycosylation | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
BP | GO:0070085 | glycosylation | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016180 | Ribosomal_L10e/L16 | 12 | 166 |
No external refs found! |