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  5. Seita.3G101000.1

Seita.3G101000.1


Description : regulatory protein *(LOTR) involved in Casparian strip formation


Gene families : OG_42_0000240 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G101000.1
Cluster HCAA Clusters: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
80985 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
Sobic.002G072700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G217900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G162000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004314 Neprosin 211 423
IPR025521 Neprosin_propep 71 187
No external refs found!