1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G101900.1

Seita.3G101900.1


Description : substrate adaptor *(PDIP38-like) of mitochondrion Clp-type protease complex & substrate adaptor *(SKIP16) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0005959 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005959_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G101900.1
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Bradi2g34310 No alias SKP1/ASK-interacting protein 16 0.03 Orthogroups_2024-Update
Cre09.g387134 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.04G184400 No alias SKP1/ASK-interacting protein 16 0.02 Orthogroups_2024-Update
HORVU1Hr1G025340.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os05g07860 No alias uvrB/uvrC motif family protein, expressed 0.03 Orthogroups_2024-Update
MA_10431000g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s191_69V6 No alias domain protein 0.04 Orthogroups_2024-Update
Sobic.009G062400.1 No alias substrate adaptor *(PDIP38-like) of mitochondrion... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007474 ApaG_domain 175 259
IPR001943 UVR_dom 120 145
No external refs found!