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  5. Seita.3G102400.1

Seita.3G102400.1


Description : R-loop reader protein *(ALBA1/2)


Gene families : OG_42_0000995 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G102400.1

Target Alias Description ECC score Gene Family Method Actions
Brara.E03436.1 No alias R-loop reader protein *(ALBA1/2) 0.01 Orthogroups_2024-Update
Brara.F02905.1 No alias R-loop reader protein *(ALBA1/2) 0.02 Orthogroups_2024-Update
Glyma.03G248100 No alias Alba DNA/RNA-binding protein 0.03 Orthogroups_2024-Update
LOC_Os02g10810 No alias protein of unknown function domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os06g40040 No alias protein of unknown function domain containing protein, expressed 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 25 86
No external refs found!