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Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN39]
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At4g18750 | |
| Cluster | HCCA clusters: Cluster_177 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 106991 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g57730 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G159100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G227300 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.08G117400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G294900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G061600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G146900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU1Hr1G082860.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os07g20420 | No alias | tetratricopeptide-like helical, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os08g28830 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os08g38610 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os10g34720 | No alias | LOI1, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_20622g0010 | No alias | (at5g09950 : 731.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| MA_68707g0010 | No alias | (at3g24000 : 546.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| MA_97789g0010 | No alias | (at3g26540 : 452.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
| PSME_00025402-RA | No alias | (at3g02010 : 629.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00029429-RA | No alias | (at3g13770 : 552.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00048766-RA | No alias | (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G258500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.001G466066 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.003G223900 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.010G086200 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.012G048800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.018G040100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G311600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.2G001800.1 | No alias | RNA editing factor *(ELI1) | 0.02 | Orthogroups_2024-Update | |
| Seita.9G001600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G109000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G190900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc05g013200 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Sopen11g026910 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
| BP | GO:0030258 | lipid modification | IEP | Predicted GO |
| BP | GO:0046834 | lipid phosphorylation | IEP | Predicted GO |
| BP | GO:0046854 | phosphatidylinositol phosphorylation | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 334 | 360 |
| IPR032867 | DYW_dom | 737 | 861 |
| IPR002885 | Pentatricopeptide_repeat | 563 | 611 |
| IPR002885 | Pentatricopeptide_repeat | 163 | 205 |
| IPR002885 | Pentatricopeptide_repeat | 461 | 510 |
| IPR002885 | Pentatricopeptide_repeat | 260 | 307 |
| IPR002885 | Pentatricopeptide_repeat | 361 | 409 |
| No external refs found! |