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  5. Seita.3G105100.1

Seita.3G105100.1


Description : LRR-domain extensin


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G105100.1
Cluster HCAA Clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
134330 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
412903 No alias Leucine-rich repeat (LRR) family protein 0.06 Orthogroups_2024-Update
81544 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
A4A49_26804 No alias pollen-specific leucine-rich repeat extensin-like protein 1 0.02 Orthogroups_2024-Update
At2g19780 No alias Leucine-rich repeat (LRR) family protein... 0.06 Orthogroups_2024-Update
At4g13340 No alias Leucine-rich repeat extensin-like protein 3... 0.04 Orthogroups_2024-Update
Bradi1g14050 No alias Leucine-rich repeat (LRR) family protein 0.06 Orthogroups_2024-Update
Bradi1g55720 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
GRMZM2G341410 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Glyma.05G225300 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Glyma.09G188600 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Glyma.10G245100 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G016710.2 No alias LRR-domain extensin 0.02 Orthogroups_2024-Update
MA_7188g0010 No alias (at4g18670 : 352.0) Leucine-rich repeat (LRR) family... 0.03 Orthogroups_2024-Update
PSME_00026301-RA No alias (at4g13340 : 513.0) Leucine-rich repeat (LRR) family... 0.01 Orthogroups_2024-Update
Potri.006G152800 No alias Leucine-rich repeat (LRR) family protein 0.05 Orthogroups_2024-Update
Potri.006G162300 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Potri.010G083100 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Potri.018G075900 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Pp1s96_30V6 No alias T9E8.80; leucine-rich repeat family protein / extensin... 0.02 Orthogroups_2024-Update
Sobic.003G205600.1 No alias LRR-domain extensin 0.01 Orthogroups_2024-Update
Sobic.009G066200.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Solyc11g005150 No alias entensin X55687 0.03 Orthogroups_2024-Update
Solyc12g088950 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Sopen06g024030 No alias Leucine Rich Repeat 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 126 184
No external refs found!