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  5. Seita.3G108800.1

Seita.3G108800.1


Description : EC_5.5 intramolecular lyase & chalcone isomerase


Gene families : OG_42_0004773 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004773_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G108800.1
Cluster HCAA Clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
Bradi1g03840 No alias Chalcone-flavanone isomerase family protein 0.03 Orthogroups_2024-Update
Seita.9G034700.1 No alias EC_5.5 intramolecular lyase & chalcone isomerase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 9 212
No external refs found!